Norovirus Genotyping Tool

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Norovirus Typing Tool

This tool is designed to use phylogenetic methods in order to identify the Norovirus genotype of a nucleotide sequence.

The most recent update includes addition of new rare genotypes and a new GII.4 minor variant.

The typingtool was updated to conform to the changes in the nomenclature.

Updated classification of norovirus genogroups and genotypes. Chhabra P, de Graaf M, Parra GI, Chan MC, Green K, Martella V, Wang Q, White PA, Katayama K, Vennema H, Koopmans MPG, Vinje J. J Gen Virol. 2019 Sep 4.

New names are followed by old names in parenthesis on the results page and further described on the report page.

Note for batch analysis: The genotypetool accepts up to 2000 sequences at a time.

Input

Submit one or more FASTA sequences to be typed individually. If you have raw NGS reads (short reads or long reads), please use the Genome Detective Platform to assemble first. Subtyping tools will be linked in the results.
Click here to load some sample data.

Sequence

click or drop file

Revisit results from a previous run

Job-id