Version 2.16.1 Genome Detective Platform
NGS Details (SRR3458562_Metagenome_example): Bellamyvirus bellamy
Assembly
195 (1 contig(s))
6.2
14
0.90 rpm (after QC)
0
de novo + reference guided assembly
Bcf Tools
Coverage Map
Variant Tables
Assignment
Alignment
218.0 (NT) + 432.0 (AA) = 650.0
76.1124
Local, heuristic, nucleotide (BLASTN)
Genome Region
Select a protein in the search box or a mutation in the table below to see the alignment details. Duplicated protein names are extended with "- CDS name".
Alignment Detailed Statistics
| Begin | End | Coverage | Score | Concordance | Matches | Identities | I/D/M/F* | Stop Codons | |
|---|---|---|---|---|---|---|---|---|---|
| NT | 196649 | 196843 | 0.1% | 218 | 55.9% | 195 (100%) | 152 (77.9%) | 0/0 | |
| Mutations: | 196652G>A, 196655A>T, 196656A>T, 196670C>T, 196671C>T, 196673C>A, 196676C>T, 196677G>A, 196685C>T, 196691A>T, 196700C>A, 196703C>T, 196706A>T, 196712C>T, 196718T>C, 196724C>T, 196725A>G, 196727T>A, 196728A>G, 196733T>C, 196734G>A, 196739A>G, 196748T>A, 196749C>A, 196751G>T, 196757C>T, 196763A>T, 196766C>T, 196767G>A, 196769A>C, 196770C>A, 196778C>T, 196782G>A, 196783G>A, 196784T>C, 196787G>T, 196805C>T, 196808G>A, 196811C>T, 196820C>T, 196829A>T, 196832C>A, 196838C>A | ||||||||