NGS Details (SRR3458562_Metagenome_example): Peduovirus P2

Assembly

250 (1 contig(s))
6.2
13
0.84 rpm (after QC)
0
de novo + reference guided assembly
Bcf Tools

Coverage Map

Variant Tables

Assignment

Peduovirus P2 (Taxonomy ID: 10679)
99.6
97.619
0
46

Alignment

496.0 (NT) + 536.0 (AA) = 1032.0
99.3263
Local, heuristic, nucleotide (BLASTN)

Alignment Detailed Statistics

BeginEndCoverageScoreConcordanceMatchesIdentitiesI/D/M/F*Stop Codons
NT25793260420.8%49699.2%250 (100%)249 (99.6%)0/0
Mutations:25811G>T
CDS
7716048.6%53698.5%84 (100%)82 (97.6%)0/0/0/00
Protein mutations:A83S (25811G>T)
Codon mutations:GCC83TCC (25811G>T)
Proteins
7716048.6%53698.5%84 (100%)82 (97.6%)0/0/0/00
Protein mutations:A83S (25811G>T)
Codon mutations:GCC83TCC (25811G>T)
*: Inserts / Deletes / Misaligned / Frameshifts

Analysis details

This analysis was performed with panviral2.43