Version 2.16.3
Genome Detective Platform

NGS Details (SRR3458562_Metagenome_example): Marienburgvirus BP4795

Assembly

155 (1 contig(s))
6.5
10
0.65 rpm (after QC)
0
de novo + reference guided assembly
Bcf Tools

Coverage Map

Variant Tables

Assignment

Marienburgvirus BP4795 (Taxonomy ID: 2844125)
98.7097
96.1538
0
85

Alignment

302.0 (NT) + 343.0 (AA) = 645.0
98.0243
Local, heuristic, nucleotide (BLASTN)

Alignment Detailed Statistics

BeginEndCoverageScoreConcordanceMatchesIdentitiesI/D/M/F*Stop Codons
NT13096132500.3%30297.4%155 (100%)153 (98.7%)0/0
Mutations:13239T>A, 13242A>C
CDS
14920022.2%34397.4%52 (100%)50 (96.2%)0/0/0/00
Protein mutations:E197D (13242A>C)
Codon mutations:CCT196CCA (13239T>A), GAA197GAC (13242A>C)
Proteins
14920022.2%34397.4%52 (100%)50 (96.2%)0/0/0/00
Protein mutations:E197D (13242A>C)
Codon mutations:CCT196CCA (13239T>A), GAA197GAC (13242A>C)
*: Inserts / Deletes / Misaligned / Frameshifts

Analysis details

This analysis was performed with panviral2.43