Version 2.16.1 Genome Detective Platform
NGS Details (SRR3458562_Metagenome_example): Betapolyomavirus hominis
Assembly
5148 (1 contig(s))
3512.0
169687
10948.96 rpm (after QC)
0
read mapping against reference + variant calling
Bcf Tools
Coverage Map
Variant Tables
Assignment
Alignment
10189.0 (NT) + 13224.0 (AA) = 23413.0
99.4351
Global, seeded, nucleotide + amino acids (AGA)
Genome Region
Sequence starts at position 1 and ends at position 5153 relative to NC_001538.1 reference sequence.
NC_001538.1
SRR3458562_Metagenome_example-NC_001538.1-90-0
NC_001538.1
SRR3458562_Metagenome_example-NC_001538.1-90-0
NC_001538.1
SRR3458562_Metagenome_example-NC_001538.1-90-0
TTTTGCAAAAATTGCAAAAGAATAGGGATTTCCCCAAATAGTTTTGCTAGGCCTCAGAAAAAGCCTCCACACCCTTACTACTTGAGAGAAAGGGTGGAGGCAGAGGCGGCCTCGGCCTCTTATATATTATAAAAAAAAAGGCCACAGGGAGGAGCTGCTTACCCATGGAATGCAGCCAAACCATGACCTCAGGAAGGAAAGTGCATGACTCACAGGGGAATGCAGCCAAACCATGACCTCAGGAAGGAAAGTGCATGACTCACAGGGAGGAGCTGCTTACCCATGGAATGCAGCCAAACCATGACCTCAGGAAGGAAAGTGCATGAC--------------------------------------------------AGACATGTTTTGCGAGCCTAGGAATCTTGGCCTTGTCCCCAGTTAAACTGGACAAAGGCCATGGTTCTGCGCCAGCTGTCACGACAAGCTTCAGTGAAAGTTGGTAAAACCTGGACTGGAACAAAAAAAAGAGCTCAGAGGATTTTTATTTTTATTTTAGAGCTTTTGCTGGAATTTTGTAGAGGTGAAGACAGTGTAGACGGGAAAAACAAAAGTACCACTGCTTTACCTGCTGTAAAAGACTCTGTAAAAGACTCCTAGGTAAGTAATCCCTTTTTTTTTGTATTTCCAGGTTCATGGGTGCTGCTCTAGCACTTTTGGGGGACCTAGTTGCCAGTGTATCTGAGGCTGCTGCTGCCACAGGATTTTCAGTGGCTGAAATTGCTGCTGGGGAGGCTGCTGCTGCTATAGAAGTTCAAATTGCATCCCTTGCTACTGTAGAGGGCATAACAAGTACCTCAGAGGCTATAGCTGCTATAGGCCTAACTCCTCAAACATATGCTGTAATTGCTGGTGCTCCTGGGGCTATTGCTGGGTTTGCTGCTTTAATTCAAACTGTTAGTGGTATTAGTTCCTTAGCTCAAGTAGGGTATAAGTTCTTTGATGATTGGGATCACAAAGTT
TCCACTGTAGGCCTCTATCAGCAATCAGGCATGGCTTTGGAATTGTTTAACCCAGATGAGTACTATGATATTCTGTTTCCTGGTGTAAATACTTTTGTTAATAATATTCAATACCTTGATCCTAGGCATTGGGGTCCTTCTTTGTTTGCTACTATTTCCCAGGCTTTGTGGCATGTTATTAGGGATGATATACCTTCTATAACCTCACAGGAATTGCAGAGAAGAACAGAAAGATTTTTTAGAGACTCCTTGGCTAGATTTTTGGAGGAAACTACCTGGACAATTGTAAATGCCCCTATAAACTTTTATAATTATATTCAACAATATTATTCTGATCTTTCCCCTATTAGGCCCTCAATGGTTAGACAAGTAGCTGAAAGGGAAGGTACCCGTGTACATTTTGGCCATACTTATAGTATAGATGATGCTGACAGTATAGAAGAAGTTACACAAAGAATGGACTTAAGAAATCAACAAAGTGTACATTCAGGAGAGTTTATAGAAAAAACTATTGCCCCAGGAGGTGCTAATCAAAGAACTGCTCCTCAATGGATGTTGCCTTTACTTCTAGGCCTGTACGGGACTGTAACACCTGCTCTTGAAGCATATGAAGATGGCCCCAACCAAAAGAAAAGGAGAGTGTCCAGGGGCAGCTCCCAAAAAGCCAAAGGAACCCGTGCAAGTGCCAAAACTACTAATAAAAGGAGGAGTAGAAGTTCTAGAAGTTAAAACTGGGGTAGATGCTATTACAGAGGTAGAATGCTTCCTAAACCCAGAAATGGGGGATCCAGATGAAAACCTTAGGGGCTTTAGTCTAAAGCTAAGTGCTGAAAATGACTTTAGCAGTGATAGCCCAGAGAGAAAAATGCTTCCCTGTTACAGCACAGCAAGAATTCCCCTCCCCAATTTAAATGAGGACCTAACCTGTGGAAATCTACTGATGTGGGAGGCTGTAACTGTACAAACAGAGGTTATTGGAATAACTAGCATGCTTAACCTT
CATGCAGGGTCACAAAAAGTGCATGAGCATGGTGGAGGAAAACCTATTCAAGGCAGTAATTTCCACTTCTTTGCTGTAGGTGGAGAACCCTTGGAAATGCAGGGAGTGCTAATGAATTACAGGTCAAAGTACCCTGATGGTACTATAACCCCTAAAAACCCAACAGCCCAGTCCCAGGTAATGAATACTGACCATAAGGCCTATTTGGACAAAAACAATGCTTATCCAGTTGAGTGCTGGGTACCTGATCCCAGTAGAAATGAAAATGCTAGGTATTTTGGGACTTTCACAGGAGGGGAAAATGTTCCCCCAGTACTTCATGTGACCAACACAGCTACCACAGTGTTGCTAGATGAACAGGGTGTGGGGCCTCTTTGTAAAGCTGATAGCCTGTATGTTTCAGCTGCTGATATTTGTGGCCTGTTTACTAACAGCTCTGGAACACAACAGTGGAGAGGCCTTGCAAGATATTTTAAGATCCGCCTGAGAAAAAGATCTGTAAAGAATCCTTACCCAATTTCCTTTTTGCTAAGTGACCTTATAAACAGGAGAACCCAGAGAGTGGATGGGCAGCCTATGTATGGTATGGAATCCCAGGTAGAAGAGGTTAGGGTGTTTGATGGCACAGAAAGACTTCCAGGGGACCCAGATATGATAAGATATATTGACAAACAGGGACAATTGCAAACCAAAATGCTTTAAACAGGTGCTTTTATTGTACATATACATTTAATAAATGCTGCTTTTGTATAAGCCACTTTTAAGCTTGTGTTATTTTGGGGGTGGTGTTTTAGGCCTTTTAAAACACTGAAAGCCTTTACACAAATGCAACTCTTGACTATGGGGGTCTGACCTTTGGGAATCTTCAGCAGGGGCTGAAGTATCTGAGACTTGGGAAGAGCATTGTGATTGGGATTCAGTGCTTGATCCATGTCCAGAGTCTTCAGTTTCTGAATCCTCTTCTCTTGTAATATCAAGAATACATTTCCCCATGCATATA
TTATATTTCATCCTTGAAAAAGTATACATACTTATCTCAGAATCCAGCCTTTCCTTCCATTCAACAATTCTAGATTGTATATCAGTTGCAAAATCAGCTACAGGCCTAAACCAAATTAGCAGTAGCAACAAGGTCATTCCACTTTGTAAAATTCTTTTTTCAAGTAAGAACTCTGAGTTTTGTAAGGATTTTCTTAAATATATTTTGGGCCTAAAATCTATTTGTCTTACAAATCTAGCTTGCAGGGTTTTAGGGACAGGATACTCATTCATTGTAACCAAGCCTGGTGGAAATATTTGGGTTCTTTTGTTTAAATGTTTCTTTTCTAAATTTACCTTAACACTTCCATCTAAATAATCTCTCAAACTGTCTAAATTGTTTATTCCATGTCCTGAAGGCAAATCCTTTGATTCAGCTCCTGTCCCTTTTACATCTTCAAAAACAACCATGTACTGATCTATAGCTACACCTAGCTCAAAGGTTAGCCTTTCCATGGGTAGGTTTACATTTAAGGCTTTACCACCACACAAATCTAATAACCCTGCAGCTAGTGTTGTTTTTCCACTATCAATGGGACCTTTAAATAACCAGTATCTTCTTTTAGGTACATTGAAAACAATACAGTGCAAAAAATCAAATATTACAGAATCCATTTTAGGTAGCAAACAGTGCAGCCAAGCAACACCTGCCATATATTGTTCTAGTACAGCATTTCCATGAGCTCCAAATATTAAATCCATTTTATCTAATATATGATTGAATCTTTCTGTTAGCATTTCTTCCCTGGTCATATGAAGGGTATCTACTCTTTTTTTAGCTAAAACTGTATCTACTGCTTGCTGACAAATACTTTTTTGATTTTTACTTTCTGCAAAAATAATAGCATTTGCAAAGTGCTTTTCATGATACTTAAAGTGATAAGGCTGGTCTTTTTTCTGACACTTTTTACACTCCTCTACATTGTATTGAAATTCTAAATACATACCTAATAATAAAAACA
CATCCTCACACTTTGTCTCTACTGCATACTCAGTAATTAATTTCCAAGACACCTGCTTTGTTTCTTCAGGCTCTTCTGGGCTAAAATCATGCTCCTTTAAGCCCCCTTGAATGCTTTCTTCTATAGTATGGTATGGATCTCTAGTTAAGGCACTATATAGTAAGTATTCCTTATTAACACCCTTACAAATTAAAAAACTAAAGGTACACAGCTTTTGACAGAAATTATTAATTGCAGAAACTCTATGTCTATGTGGAGTTAAAAAGAATATAATATTATGCCCAGCACACATGTGTCTACTAATAAAAGTTACAGAATATTTTTCCATAAGTTTTTTATACAGAATTTGAGCTTTTTCTTTAGTAGTATACACAGCAAAGCAGGCAAGGGTTCTATTACTAAATACAGCTTGACTAAGAAACTGGTGTAGATCAGAGGGAAAGTCTTTAGGGTCTTCTACCTTTCTTTTTTTTTTGGGTGGTGTTGAGTGTTGAGAATCTGCTGTTGCTTCTTCATCACTGGCAAACATATCTTCATGGCAAAATAAATCTTCATCCCATTTTTCATTAAAGGAACTCCACCAGGACTCCCACTCTTCTGTTCCATAGGTTGGCACCTATAAAAAAAATAATTACTTAGGGCCTTTTAATATTTTATTATTTATCTAAATATAAGTTAGTTACCTTAAAGCTTTAGATCTCTGAAGGGAGTTTCTCCAATTATTTGGACCCACCATTGCAGAGTTTCTTCAGTTAGGTCTAAGCCAAACCACTGTGTGAAGCAGTCAATGCAGTAGCAATCTATCCAAACCAAGGGCTCTTTTCTTAAAAATTTTCTATTTAAATGCCTTAATCTAAGCTGACATAGCATGCAAGGGCAGTGCACAGAAGGCTTTTTGGAACAAATAGGCCATTCCTTGCAGTACAGGGTATCTGGGCAAAGAGGAAAATCAGCACAAACCTCTGAGCTACTCCAGGTTCCAAAATCAGGCTGATGAGCT
ACCTTTACATCCTGCTCCATTTTTTTATACAAAGTATTCATTCTCTTCATTTTATCCTCGTCGCCCCCTTTGTCAGGGTGAAATTCCTTACACTTCCTTAAATAAGCTTTTCTCATTAAGGGAAGATTTCCCCAGGCAGCTCTTTCAAGGCCTAAAAGGTCCATGAGCTCCATGGATTCTTCCCTGTTAAGAACTTTATCCAT
TTTTGCAAAAATTGCAAAAGAATAGGGATTTCCCCAAATAGTTTTGCTAGGCCTCAGAAAAAGCCTCCACACCCTTACTACTTGAGAGAAAGGGTGGAGGCAGAGGCGGCCTCGGCCTCTTATATATTATAAAAAAAAAGGCCACAGGGAGGAGCTGCTTACCCATGGAATGCAGCCAAACCATGACCTCAGGAAGGAAAGTGCATGACTC.....GGAATGCAGCCAAACCATGACCTCAGGAAGGAAAGTGCATGACTCACAGGGAGGAGCTGCTTACCCATGGAATGCAGCCAAACCATGACCTCAGGAAGGAAAGTGCATGACTGGGCAGCCAGCCAGTGGCAGTTAATAGTGAAACCGGAAAGCAGCCAGACAGACATGTTTTGCGAGCCTAGGAATCTTGGCCTTGTCCCCAGTTAAACTGGACAAAGGCCATGGTTCTGCGCCAGCTGTCACGACAAGCTTCAGTGAAAGTTGGTAAAACCTGGACTGGAACAAAAAAAAGAGCTCAGAGGATTTTTATTTTTATTTTAGAGCTTTTGCTGGAATTTTGTAGAGGTGAAGACAGTGTAGACGGGAAAAACAAAAGTACCACTGCTTTACCTGCTGTAAAAGACTCTGTAAAAGACTCCTAGGTAAGTAATCCCTTTTTTTTTGTATTTCCAGGTTCATGGGTGCTGCTCTAGCACTTTTGGGGGACCTAGTTGCCAGTGTATCTGAGGCTGCTGCTGCCACAGGATTTTCAGTGGCTGAAATTGCTGCTGGGGAGGCTGCTGCTGCTATAGAAGTTCAAATTGCATCCCTTGCTACTGTAGAGGGCATAACAAGTACCTCAGAGGCTATAGCTGCTATAGGCCTAACTCCTCAAACATATGCTGTAATTGCTGGTGCTCCTGGGGCTATTGCTGGGTTTGCTGCTTTAATTCAAACTGTTAGTGGTATTAGTTCCTTGGCTCAAGTAGGGTATAGGTTCTTTAGTGATTGGGATCACAAAGTT
TCCACTGTAGGCCTCTATCAGCAATCAGGCATGGCTTTGGAATTGTTTAACCCAGATGAGTACTATGATATTCTGTTTCCTGGTGTAAATACTTTTGTTAATAATATTCAATACCTTGATCCTAGGCATTGGGGTCCTTCTTTGTTTGCTACTATTTCCCAGGCTTTGTGGCATGTTATTAGGGATGATATACCTTCTATAACCTCACAGGAATTGCAGAGAAGAACAGAAAGATTTTTTAGAGACTCCTTGGCTAGATTTTTGGAGGAAACTACCTGGACAATTGTAAATGCCCCTATAAACTTTTATAATTATATTCAACAATATTATTCTGATCTTTCCCCTATTAGGCCCTCAATGGTTAGACAAGTAGCTGAAAGGGAAGGTACCCGTGTACATTTTGGCCATACTTATAGTATAGATGATGCTGACAGTATAGAAGAAGTTACACAAAGAATGGACTTAAGAAATCAACAAAGTGTACATTCAGGAGAGTTTATAGAAAAAACTATTGCCCCAGGAGGTGCTAATCAAAGAACTGCTCCTCAATGGATGTTGCCTTTACTTCTAGGCCTGTACGGGACTGTAACACCTGCTCTTGAAGCATATGAAGATGGCCCCAACCAAAAGAAAAGGAGAGTGTCCAGGGGCAGCTCCCAAAAAGCCAAAGGAACCCGTGCAAGTGCCAAAACTACTAATAAAAGGAGGAGTAGAAGTTCTAGAAGTTAAAACTGGGGTAGATGCTATTACAGAGGTAGAATGCTTCCTAAACCCAGAAATGGGGGATCCAGATGAAAACCTTAGGGGCTTTAGTCTAAAGCTAAGTGCTGAAAATGACTTTAGCAGTGATAGCCCAGAGAGAAAAATGCTTCCCTGTTACAGCACAGCAAGAATTCCCCTCCCCAATTTAAATGAGGACCTAACCTGTGGAAATCTACTGATGTGGGAGGCTGTAACTGTACAAACAGAGGTTATTGGAATAACTAGCATGCTTAACCTT
CATGCAGGGTCACAAAAAGTGCATGAGCATGGTGGAGGAAAACCTATTCAAGGCAGTAATTTCCACTTCTTTGCTGTTGGTGGAGACCCCTTGGAAATGCAGGGAGTGCTAATGAATTACAGGACAAAGTACCCAGATGGTACTATAACCCCTAAAAACCCAACAGCCCAGTCCCAGGTAATGAATACTGACCATAAGGCCTATTTGGACAAAAACAATGCTTATCCAGTTGAGTGCTGGGTTCCTGATCCCAGTAGAAATGAAAATACTAGGTATTTTGGGACTTTCACAGGAGGGGAAAATGTTCCCCCAGTACTTCATGTGACCAACACAGCTACCACAGTGTTGCTAGATGAACAGGGTGTGGGGCCTCTTTGTAAAGCTGATAGCCTGTATGTTTCAGCTGCTGATATTTGTGGCCTGTTTACTAACAGCTCTGGAACACAACAGTGGAGAGGCCTTGCAAGATATTTTAAGATCCGCCTGAGAAAAAGATCTGTAAAGAATCCTTACCCAATTTCCTTTTTGCTAAGTGACCTTATAAACAGGAGAACCCAGAGAGTGGATGGGCAGCCTATGTATGGTATGGAATCCCAGGTAGAAGAGGTTAGGGTGTTTGATGGCACAGAAAGACTTCCAGGGGACCCAGATATGATAAGATATATTGACAAACAGGGACAATTGCAAACCAAAATGCTTTAAACAGGTGCTTTTATTGTACATATACATTTAATAAATGCTGCTTTTGTATAAGCCACTTTTAAGCTTGTGTTATTTTGGGGGTGGTGTTTTAGGCCTTTTAAAACACTGAAAGCCTTTACACAAATGCAACTCTTGACTATGGGGGTCTGACCTTTGGGAATCTTCAGCAGGGGCTGAAGTATCTGAGACTTGGGAAGAGCATTGTGATTGGGATTCAGTGCTTGATCCATGTCCAGAGTCTTCAGTTTCTGAATCCTCTTCTCTTGTAATATCAAGAATACATTTCCCCATGCATATA
TTATATTTCATCCTTGAAAAAGTATACATACTTATCTCAGAATCCAGCCTTTCCTTCCATTCAACAATTCTAGATTGTATATCAGTTGCAAAATCAGCTACAGGCCTAAACCAAATTAGCAGTAGCAACAAGGTCATTCCACTTTGTAAAATTCTTTTTTCAAGTAAGAACTCTGAGTTTTGTAAGGATTTTCTTAAATATATTTTGGGCCTAAAATCTATTTGTCTTACAAATCTAGCTTGCAGGGTTTTAGGGACAGGATACTCATTCATTGTAACCAAGCCTGGTGGAAATATTTGGGTTCTTTTGTTTAAATGTTTCTTTTCTAAATTTACCTTAACACTTCCATCTAAATAATCTCTCAAACTGTCTAAATTGTTTATTCCATGTCCTGAAGGCAAATCCTTTGATTCAGCTCCTGTCCCTTTTACATCTTCAAAAACAACCATGTACTGATCTATAGCTACACCTAGCTCAAAGGTTAGCCTTTCCATGGGTAGGTTTACATTTAAGGCTTTACCTCCACACAAATCTAATAACCCTGCAGCTAGTGTTGTTTTTCCACTATCAATGGGACCTTTAAATAACCAGTATCTTCTTTTAGGTACATTGAAAACAATACAGTGCAAAAAATCAAATATTACAGAATCCATTTTAGGTAGCAAACAGTGCAGCCAAGCAACACCTGCCATATATTGTTCTAGTACAGCATTTCCATGAGCTCCAAATATTAAATCCATTTTATCTAATATATGATTGAATCTTTCTGTTAGCATTTCTTCCCTGGTCATATGAAGGGTATCTACTCTTTTTTTAGCTAAAACTGTATCTACTGCTTGCTGACAAATACTTTTTTGATTTTTACTTTCTGCAAAAATAATAGCATTTGCAAAGTGCTTTTCATGATACTTAAAGTGATAAGGCTGGTCTTTTTTCTGACACTTTTTACACTCCTCTACATTGTATTGAAATTCTAAATACATACCTAATAATAAAAACA
CATCCTCACACTTTGTCTCTACTGCATACTCAGTAATTAATTTCCAAGACACCTGCTTTGTTTCTTCAGGCTCTTCTGGGTTAAAATCATGCTCCTTTAAGCCCCCTTGAATGCTTTCTTCTATAGTATGGTATGGATCTCTAGTTAAGGCACTATATAGTAAGTATTCCTTATTAACACCCTTACAAATTAAAAAACTAAAGGTACACAGCTTTTGACAGAAATTATTAATTGCAGAAACTCTATGTCTATGTGGAGTTAAAAAGAATATAATATTATGCCCAGCACACATGTGTCTACTAATAAAAGTTACAGAATATTTTTCCATAAGTTTTTTATACAGAATTTGAGCTTTTTCTTTAGTAGTATACACAGCAAAGCAGGCAAGGGTTCTATTACTAAATACAGCTTGACTAAGAAACTGGTGTAGATCAGAGGGAAAGTCTTTAGGGTCTTCTACCTTTCTTTTTTTTTTGGGTGGTGTTGAGTGTTGAGAATCTGCTGTTGCTTCTTCATCACTGGCAAACATATCTTCATGGCAAAATAAATCTTCATCCCATTTTTCATTAAAGGAACTCCACCAGGACTCCCACTCTTCTGTTCCATAGGTTGGCACCTATAAAAAAAATAATTACTTAGGGCCTTTTAATATTTTATTATTTATCTAAATATAAGTTAGTTACCTTAAAGCTTTAGATCTCTGAAGGGAGTTTCTCCAATTATTTGGACCCACCATTGCAGAGTTTCTTCAGTTAGGTCTAAGCCAAACCACTGTGTGAAGCAGTCAATGCAGTAGCAATCTATCCAAACCAAGGGCTCTTTTCTTAAAAATTTTCTATTTAAATGCCTTAATCTAAGCTGACATAGCATGCAAGGGCAGTGCACAGAAGGCTTTTTGGAACAAATAGGCCATTCCTTGCAGTACAGGGTATCTGGGCAAAGAGGAAAATCAGCACAAACCTCTGAGCTACTCCAGGTTCCAAAATCAGGCTGATGAGCT
ACCTTTACATCCTGCTCCATTTTTTTATACAAAGTATTCATTCTCTTCATTTTATCCTCGTCGCCCCCTTTGTCAGGGTGAAATTCCTTACACTTCCTTAAATAAGCTTTTCTCATTAAGGGAAGATTTCCCCAGGCAGCTCTTTCAAGGCCTAAAAGGTCCATGAGCTCCATGGATTCTTCCCTGTTAAGAACTTTATCCAT
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BKPyVgp1
MVLRQLSRQASVKVGKTWTGTKKRAQRIFIFILELLLEFCRGEDSVDGKNKSTTALPAVKDSVKDS*
MVLRQLSRQASVKVGKTWTGTKKRAQRIFIFILELLLEFCRGEDSVDGKNKSTTALPAVKDSVKDS*
BKPyVgp2
MGAALALLGDLVASVSEAAAATGFSVAEIAAGEAAAAIEVQIASLATVEGITSTSEAIAAIGLTPQTYAVIAGAPGAIAGFAALIQTVSGISSLAQVGYKFFDDWDHKVSTVGLYQQSGMALELFNPDEYYDILFPGVNTFVNNIQYLDPRHWGPSLFATISQALWHVIRDDIPSITSQELQRRTERFFRDSLARFLEETTWTIVNAPINFYNYIQQYYSDLSPIRPSMVRQVAEREGTRVHFGHTYSIDDADSIEEVTQRMDLRNQQSVHSGEFIEKTIAPGGANQRTAPQWMLPLLLGLYGTVTPALEAYEDGPNQKKRRVSRGSSQKAKGTRASAKTTNKRRSRSSRS*
MGAALALLGDLVASVSEAAAATGFSVAEIAAGEAAAAIEVQIASLATVEGITSTSEAIAAIGLTPQTYAVIAGAPGAIAGFAALIQTVSGISSLAQVGYRFFSDWDHKVSTVGLYQQSGMALELFNPDEYYDILFPGVNTFVNNIQYLDPRHWGPSLFATISQALWHVIRDDIPSITSQELQRRTERFFRDSLARFLEETTWTIVNAPINFYNYIQQYYSDLSPIRPSMVRQVAEREGTRVHFGHTYSIDDADSIEEVTQRMDLRNQQSVHSGEFIEKTIAPGGANQRTAPQWMLPLLLGLYGTVTPALEAYEDGPNQKKRRVSRGSSQKAKGTRASAKTTNKRRSRSSRS*
BKPyVgp4
MAPTKRKGECPGAAPKKPKEPVQVPKLLIKGGVEVLEVKTGVDAITEVECFLNPEMGDPDENLRGFSLKLSAENDFSSDSPERKMLPCYSTARIPLPNLNEDLTCGNLLMWEAVTVQTEVIGITSMLNLHAGSQKVHEHGGGKPIQGSNFHFFAVGGEPLEMQGVLMNYRSKYPDGTITPKNPTAQSQVMNTDHKAYLDKNNAYPVECWVPDPSRNENARYFGTFTGGENVPPVLHVTNTATTVLLDEQGVGPLCKADSLYVSAADICGLFTNSSGTQQWRGLARYFKIRLRKRSVKNPYPISFLLSDLINRRTQRVDGQPMYGMESQVEEVRVFDGTERLPGDPDMIRYIDKQGQLQTKML*
MAPTKRKGECPGAAPKKPKEPVQVPKLLIKGGVEVLEVKTGVDAITEVECFLNPEMGDPDENLRGFSLKLSAENDFSSDSPERKMLPCYSTARIPLPNLNEDLTCGNLLMWEAVTVQTEVIGITSMLNLHAGSQKVHEHGGGKPIQGSNFHFFAVGGDPLEMQGVLMNYRTKYPDGTITPKNPTAQSQVMNTDHKAYLDKNNAYPVECWVPDPSRNENTRYFGTFTGGENVPPVLHVTNTATTVLLDEQGVGPLCKADSLYVSAADICGLFTNSSGTQQWRGLARYFKIRLRKRSVKNPYPISFLLSDLINRRTQRVDGQPMYGMESQVEEVRVFDGTERLPGDPDMIRYIDKQGQLQTKML*
BKPyVgp5
*KPPPTKPRKFCQFGKCLHLEQSHPDSRQSDEAPASTDSVQSSCQSQSETSSGHGSDETESDEERTIDLICKGMCINYKMRSFTYMSIESDLREKWEVIRSQIDTAFDAVPRFWILLLLLTMGSQLIRKELLFESNQLSKRLYIKPRFDIQRVFRAQLTKPVPYENMTVLGPPFIQTRKNLHKKELNVKVSGDLYDRLSDLNNIGHGSPLDKSEAGTGKVDEFVVMYQDIAVGLEFTLREMPLNVNLAKGGCLDLLGAALTTKGSDIPGKFLWYRRKPVNFVICHLFDFIVSDMKPLLCHLWAVGAMYQELVANGHAGFILDMKDLIHNFRETLMEERTMHLTDVRKKALVTDVAQQCISKQNKSEAFIIANAFHKEHYKFHYPQDKKQCKKCEEVNYQFELYMGLLLFVDECKTEVAYETILKWSVQKTEEPEEPSFDHEKLGGQISEEITHYPDRTLASYLLYEKNVGKCILFSFTCLKQCFNNIASVRHRHPTLFFIINHGACMHRSIFTVSYKEMLKKYLIQAKEKTTYVAFCALTRNSFVAQSLFQHLDSPFDKPDEVKRKKKPPTSHQSDATAEEDSAFMDEHCFLDEDWKENFSSWWSEWEETGYTPV
*KPPPTKPRKFCQFGKCLHLEQSHPDSRQSDEAPASTDSVQSSCQSQSETSSGHGSDETESDEERTIDLICKGMCINYKMRSFTYMSIESDLREKWEVIRSQIDTAFDAVPRFWILLLLLTMGSQLIRKELLFESNQLSKRLYIKPRFDIQRVFRAQLTKPVPYENMTVLGPPFIQTRKNLHKKELNVKVSGDLYDRLSDLNNIGHGSPLDKSEAGTGKVDEFVVMYQDIAVGLEFTLREMPLNVNLAKGGCLDLLGAALTTKGSDIPGKFLWYRRKPVNFVICHLFDFIVSDMKPLLCHLWAVGAMYQELVANGHAGFILDMKDLIHNFRETLMEERTMHLTDVRKKALVTDVAQQCISKQNKSEAFIIANAFHKEHYKFHYPQDKKQCKKCEEVNYQFELYMGLLLFVDECKTEVAYETILKWSVQKTEEPEEPNFDHEKLGGQISEEITHYPDRTLASYLLYEKNVGKCILFSFTCLKQCFNNIASVRHRHPTLFFIINHGACMHRSIFTVSYKEMLKKYLIQAKEKTTYVAFCALTRNSFVAQSLFQHLDSPFDKPDEVKRKKKPPTSHQSDATAEEDSAFMDEHCFLDEDWKENFSSWWSEWEETGYTPV
BKPyVgp6
*LKLDRFPTEGIIQVWWQLTEETLDLGFWQTFCDICYCDIWVLPEKRLFKRNLHRLRLQCLMCPCHVSPKKSCIPWEKCYLTDPCLPFDACV
*LKLDRFPTEGIIQVWWQLTEETLDLGFWQTFCDICYCDIWVLPEKRLFKRNLHRLRLQCLMCPCHVSPKKSCIPWEKCYLTDPCLPFDACV
ESSSWTGFDPQHAVKVDQEMKKYLTNMRKMKDEDGGKDPHFEKCKRLYAKRMLPLNGWAARELGLLDMLEMSEERNLVKDM
ESSSWTGFDPQHAVKVDQEMKKYLTNMRKMKDEDGGKDPHFEKCKRLYAKRMLPLNGWAARELGLLDMLEMSEERNLVKDM
Alignment Detailed Statistics
| Begin | End | Coverage | Score | Concordance | Matches | Identities | I/D/M/F* | Stop Codons | |
|---|---|---|---|---|---|---|---|---|---|
| NT | 1 | 5153 | 99.9% | 10189 | 99.0% | 5148 (99.0%) | 5136 (98.8%) | 50/0 | |
| Mutations: | 327_328insTGGGCAGCCAGCCAGTGGCAGTTAATAGTGAAACCGGAAAGCAGCCAGAC, 905A>G, 922A>G, 930G>A, 931A>G, 2028A>T, 2037A>C, 2074T>A, 2085T>A, 2193A>T, 2218G>A, 3472A>T, 4031C>T | ||||||||
| CDS | |||||||||
| 1 | 67 | 100% | 416 | 100% | 67 (100%) | 67 (100%) | 0/0/0/0 | 1 | |
| 1 | 352 | 100% | 2323 | 99.5% | 352 (100%) | 350 (99.4%) | 0/0/0/0 | 1 | |
| Protein mutations: | K100R (922A>G), D103S (930G>A 931A>G) | ||||||||
| Codon mutations: | TTA94TTG (905A>G), AAG100AGG (922A>G), GAT103AGT (930G>A 931A>G) | ||||||||
| 1 | 233 | 100% | 1632 | 100% | 233 (100%) | 233 (100%) | 0/0/0/0 | 1 | |
| 1 | 363 | 100% | 2544 | 99.6% | 363 (100%) | 360 (99.2%) | 0/0/0/0 | 1 | |
| Protein mutations: | E158D (2037A>C), S171T (2074T>A), A219T (2218G>A) | ||||||||
| Codon mutations: | GTA155GTT (2028A>T), GAA158GAC (2037A>C), TCA171ACA (2074T>A), CCT174CCA (2085T>A), GTA210GTT (2193A>T), GCT219ACT (2218G>A) | ||||||||
| 1 | 696 | 100% | 4954 | 99.9% | 696 (100%) | 695 (99.9%) | 0/0/0/0 | 1 | |
| Protein mutations: | S260N (4031C>T) | ||||||||
| Codon mutations: | AGC260AAC (4031C>T), GGT446GGA (3472A>T) | ||||||||
| 1 | 173 | 100% | 1355 | 100% | 173 (100%) | 173 (100%) | 0/0/0/0 | 1 | |
| Proteins | |||||||||
| 1 | 67 | 100% | 416 | 100% | 67 (100%) | 67 (100%) | 0/0/0/0 | 1 | |
| Protein mutations: | none | ||||||||
| Codon mutations: | none | ||||||||
| 1 | 352 | 100% | 2323 | 99.5% | 352 (100%) | 350 (99.4%) | 0/0/0/0 | 1 | |
| Protein mutations: | K100R (922A>G), D103S (930G>A 931A>G) | ||||||||
| Codon mutations: | TTA94TTG (905A>G), AAG100AGG (922A>G), GAT103AGT (930G>A 931A>G) | ||||||||
| 1 | 233 | 100% | 1632 | 100% | 233 (100%) | 233 (100%) | 0/0/0/0 | 1 | |
| Protein mutations: | none | ||||||||
| Codon mutations: | none | ||||||||
| 1 | 363 | 100% | 2544 | 99.6% | 363 (100%) | 360 (99.2%) | 0/0/0/0 | 1 | |
| Protein mutations: | E158D (2037A>C), S171T (2074T>A), A219T (2218G>A) | ||||||||
| Codon mutations: | GTA155GTT (2028A>T), GAA158GAC (2037A>C), TCA171ACA (2074T>A), CCT174CCA (2085T>A), GTA210GTT (2193A>T), GCT219ACT (2218G>A) | ||||||||
| 1 | 696 | 100% | 4954 | 99.9% | 696 (100%) | 695 (99.9%) | 0/0/0/0 | 1 | |
| Protein mutations: | S260N (4031C>T) | ||||||||
| Codon mutations: | AGC260AAC (4031C>T), GGT446GGA (3472A>T) | ||||||||
| 1 | 173 | 100% | 1355 | 100% | 173 (100%) | 173 (100%) | 0/0/0/0 | 1 | |
| Protein mutations: | none | ||||||||
| Codon mutations: | none | ||||||||